CDS

Accession Number TCMCG007C01065
gbkey CDS
Protein Id XP_009124895.1
Location join(6843328..6843510,6843616..6843808,6843901..6843986,6845466..6845597,6845695..6845823,6845889..6846065)
Gene LOC103849939
GeneID 103849939
Organism Brassica rapa

Protein

Length 299aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009126647.3
Definition 11-beta-hydroxysteroid dehydrogenase-like 4A isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category Q
Description hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50 1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145 87, At5g50690 is HSD7, At4g10020 is HSD5
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K22418        [VIEW IN KEGG]
EC 1.1.1.146        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCTTTGATCAACAAGATCCTTAACATCTTTCTTCCCATTGTCACGTTTTCGCTTCTTGTAGTGTTCATGCCAATTTCAATATTATTCAGTCTCTTTGGCTTCATAAGGAATAGCAAAGAGTCCGACAAAGTCAATGGAAAAGTCGTCATCATCACCGGATCTTCCTCAGGAATTGGTGAGCACCTTGCATATGAGTACGCGCGTAGAGGAGCATACTTGACGTTAGTAGCTCGGAGAGAGGATCGTCTCCAACTTGTGGCTAATCGGTGTCAGAGGCTTGGATCACCCGACGTTGCCGTAGTACGTGGTGATGTCTCAGTCATTGAAGACTGTAAACGTTTTATCGAAGAAACCATCTCTCGTTTTGGAAGACTGGATCACCTGGTGAACAATGCGGGAATTGCGGAGGCCAAGTTTTTCGAAGACTATTTACAAATCTCTGATGTTCTTCCCATAATGAATACTAACTTTTGGGGACCAGTTTACACGACACATTTCGCTATACCACATTTAAAGAAAAGCAAAGGAAAGATAGTGGCGGTCGCGTCGCCTGCTGGATGGTCTGGAGTGCCAAGAATGAGTATCTATGCTGCAAGCAAAGCAGCTATGATAAACTTCTACGAGACTCTTAGAATCGAGCTTGGTCCGGAAATTGGTGTGACAATCGTGTTTCCAGGTCTAGTTGAAAACGGAAATACCAATCCGGATCTTTTAGCTGAGAAACAAGACTGGTCGCAAGTTGTTGCTATCGAGTCAGCAACTGAATGTGCCAAGGCGGTTGTCAATGGAATCTGCAGGGGGAAGACCTTTCTGGCAGAGCCGTCGTGGGTCCGCGTTCTCTTCTGGCTTAGTATTCTCTGCCCTGAGCTGTTAATCTCTAAGCCTAAAAGAAACTGA
Protein:  
MALINKILNIFLPIVTFSLLVVFMPISILFSLFGFIRNSKESDKVNGKVVIITGSSSGIGEHLAYEYARRGAYLTLVARREDRLQLVANRCQRLGSPDVAVVRGDVSVIEDCKRFIEETISRFGRLDHLVNNAGIAEAKFFEDYLQISDVLPIMNTNFWGPVYTTHFAIPHLKKSKGKIVAVASPAGWSGVPRMSIYAASKAAMINFYETLRIELGPEIGVTIVFPGLVENGNTNPDLLAEKQDWSQVVAIESATECAKAVVNGICRGKTFLAEPSWVRVLFWLSILCPELLISKPKRN